MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Parabacteroides goldsteinii
19428wG3_P14
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 123
bases: 6,785,295 bps
CDS: 5,304
rRNA: 13
tRNA: 69
tmRNA: 1
Total number of protein coding genes annotated/found:
5,206
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5019|JADGKT010000047.1
MBF0767747.1
Genome Viewer
NA
AA
810/270
20951-20142
AraC family transcriptional regulator
SEQF5019|JADGKT010000047.1
MBF0767748.1
Genome Viewer
NA
AA
1350/450
22329-20980
MATE family efflux transporter
SEQF5019|JADGKT010000047.1
MBF0767749.1
Genome Viewer
NA
AA
366/122
22982-22617
VOC family protein
SEQF5019|JADGKT010000047.1
MBF0767750.1
Genome Viewer
NA
AA
807/269
23882-23076
4Fe-4S binding protein
SEQF5019|JADGKT010000047.1
MBF0767751.1
Genome Viewer
NA
AA
630/210
24508-23879
hypothetical protein
SEQF5019|JADGKT010000047.1
MBF0767752.1
Genome Viewer
NA
AA
603/201
25107-24505
TetR/AcrR family transcriptional regulator
SEQF5019|JADGKT010000047.1
MBF0767753.1
Genome Viewer
NA
AA
801/267
25989-25189
AraC family transcriptional regulator
SEQF5019|JADGKT010000047.1
MBF0767754.1
Genome Viewer
NA
AA
681/227
26737-26057
pyridoxamine 5'-phosphate oxidase family protein
SEQF5019|JADGKT010000047.1
MBF0767755.1
Genome Viewer
NA
AA
600/200
27358-26759
uracil-DNA glycosylase
SEQF5019|JADGKT010000047.1
MBF0767756.1
Genome Viewer
NA
AA
753/251
28107-27355
inositol monophosphatase
SEQF5019|JADGKT010000047.1
MBF0767757.1
Genome Viewer
NA
AA
462/154
28580-28119
VOC family protein
SEQF5019|JADGKT010000047.1
MBF0767758.1
Genome Viewer
NA
AA
270/90
28852-28583
zinc ribbon domain-containing protein
SEQF5019|JADGKT010000047.1
MBF0767759.1
Genome Viewer
NA
AA
669/223
29531-28863
phage head-tail adapter protein
SEQF5019|JADGKT010000047.1
MBF0767760.1
Genome Viewer
NA
AA
369/123
29915-29547
BlaI/MecI/CopY family transcriptional regulator
SEQF5019|JADGKT010000017.1
MBF0765680.1
Genome Viewer
NA
AA
891/297
341-1231
aldo/keto reductase
SEQF5019|JADGKT010000017.1
MBF0765681.1
Genome Viewer
NA
AA
1617/539
1543-3159
ABC-F family ATP-binding cassette domain-containing protein
SEQF5019|JADGKT010000017.1
MBF0765682.1
Genome Viewer
NA
AA
318/106
3678-3361
nucleotidyltransferase domain-containing protein
SEQF5019|JADGKT010000017.1
MBF0765683.1
Genome Viewer
NA
AA
999/333
4751-3753
gliding motility protein GldB
SEQF5019|JADGKT010000017.1
MBF0765684.1
Genome Viewer
NA
AA
1323/441
4961-6283
MATE family efflux transporter
SEQF5019|JADGKT010000017.1
MBF0765685.1
Genome Viewer
NA
AA
3201/1067
6941-10141
TonB-dependent receptor
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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